Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s6 | AES38_RS16525 | Not Available | - | 664009 - 664650 | 21602.4 |
| hypothetical protein | AES38_RS03340 | Not Available | - | 664647 - 665309 | 24263.0 |
| acetyl-coa carboxylase biotin carboxylase subunit family protein | AES38_RS03345 | Not Available | - | 665306 - 666532 | 45033.8 |
| udp-glucose 4-epimerase gale | AES38_RS03350 | Not Available | - | 666529 - 667566 | 36755.4 |
| duf2256 and duf3253 domain-containing protein | AES38_RS03355 | Not Available | - | 667812 - 668210 | 15011.7 |
| efflux rnd transporter permease subunit | AES38_RS03360 | Not Available | + | 668399 - 671641 | 111192.0 |
| dead/deah box helicase | AES38_RS03365 | Not Available | + | 671970 - 674153 | 80497.7 |
| gnat family n-acetyltransferase | AES38_RS03370 | Not Available | + | 674252 - 674782 | 19212.8 |
| gnat family n-acetyltransferase | AES38_RS03375 | Not Available | + | 674814 - 675305 | 17566.9 |
| 5-dehydro-2-deoxygluconokinase | AES38_RS03380 | Not Available | + | 675417 - 676376 | 34213.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
