Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylbilane synthase | AES38_RS02430 | Not Available | + | 477716 - 478702 | 33960.2 |
| uroporphyrinogen-iii synthase | AES38_RS02435 | Not Available | + | 478699 - 479538 | 29238.6 |
| porphobilinogen synthase | AES38_RS02440 | Not Available | + | 479535 - 480515 | 35260.8 |
| glutamate-1-semialdehyde 2,1-aminomutase | AES38_RS02445 | Not Available | + | 480592 - 481959 | 47241.1 |
| dna/rna non-specific endonuclease | AES38_RS02450 | Not Available | - | 481964 - 482785 | 29898.0 |
| heme oxygenase (biliverdin-producing) | AES38_RS02455 | Not Available | - | 482827 - 483486 | 24783.4 |
| duf1304 domain-containing protein | AES38_RS02460 | Not Available | - | 483566 - 483958 | 13945.5 |
| mdr family oxidoreductase | AES38_RS02465 | Not Available | - | 484043 - 485068 | 33949.7 |
| 6-phosphofructokinase | AES38_RS02470 | Not Available | - | 485125 - 486150 | 36327.5 |
| rok family transcriptional regulator | AES38_RS02475 | Not Available | - | 486204 - 487394 | 41415.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
