Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna reductase | AES38_RS02380 | Not Available | - | 468134 - 469453 | 45468.1 |
| uroporphyrinogen decarboxylase | AES38_RS02385 | Not Available | + | 469568 - 470692 | 39427.5 |
| protoporphyrinogen oxidase | AES38_RS02390 | Not Available | + | 470685 - 472124 | 48703.1 |
| hypothetical protein | AES38_RS02395 | Not Available | + | 472252 - 472593 | 11732.8 |
| phage holin family protein | AES38_RS02400 | Not Available | + | 472626 - 473042 | 14926.6 |
| duf3618 domain-containing protein | AES38_RS02405 | Not Available | + | 473032 - 473307 | 10118.3 |
| polyprenol phosphomannose-dependent alpha 1,6 mannosyltransferase mptb | AES38_RS02410 | Not Available | + | 473406 - 474968 | 53189.7 |
| tigr03086 family metal-binding protein | AES38_RS02415 | Not Available | + | 475066 - 475629 | 20849.3 |
| hydrogen peroxide-dependent heme synthase | AES38_RS02420 | Not Available | + | 475699 - 476469 | 28719.0 |
| ferrochelatase | AES38_RS02425 | Not Available | + | 476469 - 477719 | 45274.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
