Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cation diffusion facilitator family transporter | AES38_RS02185 | Not Available | - | 434870 - 435787 | 32224.7 |
| pyrroline-5-carboxylate reductase | AES38_RS02190 | Not Available | + | 435921 - 436796 | 29872.5 |
| trka family potassium uptake protein | AES38_RS02195 | Not Available | - | 436825 - 437493 | 23964.9 |
| trkh family potassium uptake protein | AES38_RS02200 | Not Available | - | 437547 - 438971 | 50952.9 |
| helix-turn-helix transcriptional regulator | AES38_RS02205 | Not Available | + | 439049 - 439591 | 19570.7 |
| helix-turn-helix domain-containing protein | AES38_RS02210 | Not Available | + | 439714 - 439953 | 8560.34 |
| 30s ribosomal protein bs22 | AES38_RS15385 | Not Available | + | 440026 - 440124 | 4083.36 |
| had family phosphatase | AES38_RS02215 | Not Available | - | 440223 - 440975 | 26912.2 |
| glutaredoxin family protein | AES38_RS02220 | Not Available | + | 441053 - 441316 | 9658.51 |
| dabb family protein | AES38_RS02225 | Not Available | + | 441349 - 441651 | 10957.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
