Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | AES38_RS01985 | Not Available | + | 397373 - 398107 | 26571.5 |
| phosphocholine-specific phospholipase c | AES38_RS01990 | Not Available | - | 398181 - 400352 | 78531.3 |
| alpha-ketoglutarate-dependent dioxygenase alkb | AES38_RS01995 | Not Available | - | 400626 - 401258 | 22924.4 |
| pr6pr family membrane protein | AES38_RS02000 | Not Available | - | 401322 - 402002 | 24233.1 |
| biotin/lipoate a/b protein ligase family protein | AES38_RS02005 | Not Available | + | 402081 - 403130 | 38117.2 |
| gnat family n-acetyltransferase | AES38_RS02010 | Not Available | - | 403385 - 403669 | 10444.2 |
| amidase domain-containing protein | AES38_RS02015 | Not Available | + | 403779 - 404666 | 31147.2 |
| duf2809 domain-containing protein | AES38_RS02020 | Not Available | - | 404663 - 405160 | 17669.7 |
| phosphoglucomutase (alpha-d-glucose-1,6-bisphosphate-dependent) | AES38_RS02025 | Not Available | - | 405228 - 406868 | 58221.1 |
| prephenate dehydratase | AES38_RS02030 | Not Available | + | 406918 - 407880 | 34041.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
