Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-ketoacid dehydrogenase subunit beta | AES38_RS14325 | Not Available | - | 3020073 - 3021038 | 34944.9 |
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | AES38_RS14330 | Not Available | - | 3021128 - 3022240 | 40614.1 |
| pyridoxal phosphate-dependent aminotransferase | AES38_RS14335 | Not Available | - | 3022250 - 3023365 | 39406.9 |
| phage holin family protein | AES38_RS14340 | Not Available | + | 3023436 - 3023831 | 13848.7 |
| hypothetical protein | AES38_RS14345 | Not Available | - | 3023839 - 3025221 | 46579.7 |
| hypothetical protein | AES38_RS14350 | Not Available | - | 3025200 - 3025520 | 10655.4 |
| low molecular weight protein-tyrosine-phosphatase | AES38_RS14355 | Not Available | + | 3025655 - 3026182 | 19325.0 |
| adenylosuccinate lyase | AES38_RS14360 | Not Available | + | 3026196 - 3027578 | 50583.3 |
| hypothetical protein | AES38_RS14365 | Not Available | - | 3027661 - 3027930 | 9734.89 |
| duf308 domain-containing protein | AES38_RS14370 | Not Available | - | 3027933 - 3028607 | 22708.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
