Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AES38_RS12365 | Not Available | + | 2654693 - 2655451 | 27391.3 |
| abc transporter substrate-binding protein | AES38_RS12370 | Not Available | - | 2655636 - 2656922 | 43901.6 |
| eama family transporter rard | AES38_RS12375 | Not Available | - | 2657101 - 2658054 | 33679.3 |
| co-chaperone groes | AES38_RS12380 | Not Available | - | 2658183 - 2658479 | 10544.6 |
| class i sam-dependent methyltransferase | AES38_RS12385 | Not Available | + | 2658625 - 2659827 | 42704.7 |
| duf4190 domain-containing protein | AES38_RS15670 | Not Available | - | 2659916 - 2660320 | 13504.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | AES38_RS12395 | Not Available | - | 2660424 - 2662034 | 55762.8 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | AES38_RS12400 | Not Available | - | 2662031 - 2662648 | 21418.5 |
| alanine racemase | AES38_RS12405 | Not Available | - | 2662658 - 2664346 | 59128.9 |
| alanine racemase | AES38_RS12410 | Not Available | - | 2664343 - 2665500 | 39640.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
