Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent isocitrate dehydrogenase | AES38_RS12210 | Not Available | - | 2613775 - 2614989 | 44977.1 |
| gnat family n-acetyltransferase | AES38_RS12215 | Not Available | + | 2615188 - 2615640 | 16524.3 |
| mgmt family protein | AES38_RS12220 | Not Available | + | 2615644 - 2615964 | 11486.7 |
| abc transporter atp-binding protein | AES38_RS12230 | Not Available | - | 2616545 - 2618353 | 65345.2 |
| abc transporter atp-binding protein | AES38_RS12235 | Not Available | - | 2618350 - 2620197 | 66379.5 |
| dimethylargininase | AES38_RS16500 | Not Available | - | 2620731 - 2622089 | 47714.1 |
| 5s ribosomal rna | Not Available | Not Available | + | 2622495 - 2622611 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 2622728 - 2625847 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | + | 2626275 - 2627795 | Not Available |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | AES38_RS12260 | Not Available | - | 2628371 - 2629996 | 56848.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
