Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase family protein | AES38_RS10785 | Not Available | + | 2308331 - 2309023 | 24019.2 |
| duf3090 domain-containing protein | AES38_RS10790 | Not Available | + | 2309047 - 2309604 | 20237.7 |
| sco1664 family protein | AES38_RS10795 | Not Available | + | 2309604 - 2310371 | 27720.8 |
| hypothetical protein | AES38_RS15860 | Not Available | + | 2310841 - 2312328 | 53961.5 |
| 30s ribosomal protein s6 | AES38_RS10800 | Not Available | - | 2312545 - 2312772 | 7959.34 |
| restriction endonuclease subunit s | AES38_RS10805 | Not Available | - | 2312843 - 2313844 | 36801.0 |
| class i sam-dependent dna methyltransferase | AES38_RS10810 | Not Available | - | 2313841 - 2315703 | 68830.5 |
| redox-regulated atpase ychf | AES38_RS10815 | Not Available | - | 2315754 - 2316848 | 39151.7 |
| 3'-5' exonuclease | AES38_RS10820 | Not Available | + | 2316948 - 2317577 | 21816.7 |
| dna recombination protein rmuc | AES38_RS10825 | Not Available | + | 2317666 - 2319045 | 49674.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
