Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine-protein kinase | AES38_RS10585 | Not Available | - | 2263955 - 2265544 | 54499.7 |
| citrate synthase | AES38_RS10590 | Not Available | - | 2265758 - 2267083 | 48771.8 |
| succinyldiaminopimelate transaminase | AES38_RS10595 | Not Available | - | 2267245 - 2268363 | 39900.3 |
| ferredoxin | AES38_RS10600 | Not Available | - | 2268369 - 2268689 | 11648.6 |
| pig-l family deacetylase | AES38_RS10605 | Not Available | - | 2268730 - 2270088 | 47317.4 |
| iron uptake transporter permease efeu | AES38_RS10610 | Not Available | + | 2270265 - 2271152 | 30807.0 |
| iron uptake system protein efeo | AES38_RS10615 | Not Available | + | 2271225 - 2272436 | 42277.5 |
| iron uptake transporter deferrochelatase/peroxidase subunit | AES38_RS10620 | Not Available | + | 2272436 - 2273779 | 46584.5 |
| hypothetical protein | AES38_RS10625 | Not Available | - | 2273796 - 2274308 | 16932.7 |
| translational gtpase typa | AES38_RS10630 | Not Available | - | 2274316 - 2276223 | 69713.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
