Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor nusa | AES38_RS10490 | Not Available | - | 2232080 - 2233087 | 36309.5 |
| proline--trna ligase | AES38_RS10495 | Not Available | - | 2233173 - 2234945 | 63782.7 |
| nad(p)-dependent oxidoreductase | AES38_RS10500 | Not Available | - | 2234988 - 2235998 | 34521.3 |
| alpha/beta fold hydrolase | AES38_RS10505 | Not Available | - | 2235995 - 2238667 | 91259.6 |
| 3-oxoacyl-acp synthase iii | AES38_RS10510 | Not Available | - | 2238673 - 2239704 | 36802.0 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | AES38_RS10515 | Not Available | - | 2239810 - 2240955 | 40492.0 |
| rip metalloprotease | AES38_RS10520 | Not Available | - | 2241022 - 2242449 | 48818.4 |
| serine/threonine-protein kinase | AES38_RS10525 | Not Available | + | 2242583 - 2243854 | 43384.7 |
| hypothetical protein | AES38_RS10530 | Not Available | + | 2243851 - 2244450 | 19524.1 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | AES38_RS10535 | Not Available | - | 2244535 - 2245617 | 38314.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
