Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase ii | AES38_RS10010 | Not Available | - | 2128173 - 2128781 | 21066.5 |
| hypothetical protein | AES38_RS10015 | Not Available | - | 2128791 - 2129318 | 17869.9 |
| type 1 glutamine amidotransferase domain-containing protein | AES38_RS10020 | Not Available | - | 2129354 - 2129920 | 20154.4 |
| smp-30/gluconolactonase/lre family protein | AES38_RS10025 | Not Available | - | 2129974 - 2130876 | 31852.2 |
| dps family protein | AES38_RS10030 | Not Available | + | 2131117 - 2131677 | 20929.2 |
| sdr family nad(p)-dependent oxidoreductase | AES38_RS10035 | Not Available | + | 2131789 - 2132586 | 28166.2 |
| duf2945 domain-containing protein | AES38_RS10040 | Not Available | + | 2132586 - 2132795 | 7537.68 |
| sensor histidine kinase | AES38_RS10045 | Not Available | + | 2132875 - 2134119 | 42796.8 |
| response regulator transcription factor | AES38_RS10050 | Not Available | + | 2134116 - 2134778 | 23250.9 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | AES38_RS10055 | Not Available | - | 2134811 - 2136121 | 43604.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
