Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional repressor lexa | AES38_RS09810 | Not Available | + | 2084938 - 2085618 | 24307.4 |
| gtpase hflx | AES38_RS09815 | Not Available | - | 2085700 - 2087265 | 56058.1 |
| class i sam-dependent methyltransferase | AES38_RS09820 | Not Available | + | 2087307 - 2087933 | 22338.6 |
| diaminopimelate epimerase | AES38_RS09825 | Not Available | - | 2087988 - 2088866 | 30580.2 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | AES38_RS09830 | Not Available | - | 2088876 - 2089799 | 33224.7 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | AES38_RS09835 | Not Available | - | 2089796 - 2091379 | 57118.7 |
| regulatory protein recx | AES38_RS16325 | Not Available | - | 2091430 - 2092482 | 38666.0 |
| recombinase reca | AES38_RS09845 | Not Available | - | 2092606 - 2093691 | 38351.0 |
| duf3046 domain-containing protein | AES38_RS09850 | Not Available | - | 2093958 - 2094182 | 7982.56 |
| helix-turn-helix domain-containing protein | AES38_RS09855 | Not Available | - | 2094321 - 2094629 | 11062.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
