Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine abc transporter substrate-binding protein | AES38_RS08220 | Not Available | + | 1751957 - 1752967 | 35971.3 |
| dead/deah box helicase | AES38_RS08225 | Not Available | - | 1753083 - 1754891 | 66291.4 |
| acyl-coa dehydrogenase family protein | AES38_RS08230 | Not Available | - | 1755091 - 1756272 | 41554.3 |
| voc family protein | AES38_RS08235 | Not Available | - | 1756323 - 1757174 | 29983.1 |
| sgnh/gdsl hydrolase family protein | AES38_RS08240 | Not Available | + | 1757303 - 1758094 | 28998.3 |
| d-alanyl-d-alanine carboxypeptidase family protein | AES38_RS08245 | Not Available | - | 1758164 - 1759378 | 41073.7 |
| rna methyltransferase | AES38_RS08250 | Not Available | - | 1759375 - 1760184 | 28809.7 |
| sir2 family nad-dependent protein deacetylase | AES38_RS08255 | Not Available | + | 1760339 - 1761193 | 30359.0 |
| histidine phosphatase family protein | AES38_RS08260 | Not Available | + | 1761190 - 1761825 | 21424.4 |
| glycosyltransferase family 1 protein | AES38_RS08265 | Not Available | - | 1761841 - 1762935 | 40429.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
