Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | AES38_RS05950 | Not Available | - | 1255200 - 1255898 | 24530.8 |
| sensor histidine kinase | AES38_RS05955 | Not Available | - | 1255895 - 1257193 | 45008.4 |
| abc transporter permease subunit | AES38_RS05960 | Not Available | - | 1257226 - 1258065 | 28991.4 |
| abc transporter atp-binding protein | AES38_RS05965 | Not Available | - | 1258062 - 1258997 | 32525.3 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | AES38_RS05970 | Not Available | - | 1259127 - 1260332 | 42244.8 |
| hypothetical protein | AES38_RS05975 | Not Available | + | 1260571 - 1261071 | 17621.5 |
| pkd domain-containing protein | AES38_RS16285 | Not Available | + | 1261485 - 1261964 | 16634.6 |
| s1c family serine protease | AES38_RS05985 | Not Available | + | 1262164 - 1263693 | 49400.1 |
| glycosyltransferase family 2 protein | AES38_RS05990 | Not Available | + | 1263843 - 1264916 | 38231.0 |
| cdp-alcohol phosphatidyltransferase family protein | AES38_RS05995 | Not Available | + | 1264913 - 1265734 | 29054.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
