Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peroxide stress protein yaaa | AES38_RS05435 | Not Available | + | 1135908 - 1136663 | 26703.0 |
| dna-3-methyladenine glycosylase i | AES38_RS05440 | Not Available | - | 1136737 - 1137330 | 21576.5 |
| methylated-dna--[protein]-cysteine s-methyltransferase | AES38_RS05445 | Not Available | - | 1137327 - 1137923 | 20550.9 |
| lrp/asnc family transcriptional regulator | AES38_RS05450 | Not Available | - | 1138030 - 1138509 | 17170.6 |
| fha domain-containing protein | AES38_RS05455 | Not Available | + | 1138729 - 1139793 | 35551.4 |
| pp2c family serine/threonine-protein phosphatase | AES38_RS05460 | Not Available | + | 1139790 - 1140623 | 29621.8 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | AES38_RS05465 | Not Available | - | 1140642 - 1141628 | 33664.0 |
| succinyl-diaminopimelate desuccinylase | AES38_RS05470 | Not Available | + | 1141709 - 1142806 | 39081.1 |
| hypothetical protein | AES38_RS05475 | Not Available | + | 1142788 - 1144020 | 44349.8 |
| duf3117 domain-containing protein | AES38_RS15425 | Not Available | + | 1144168 - 1144341 | 5886.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
