Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | AES38_RS05285 | Not Available | + | 1104401 - 1105165 | 26684.6 |
| sdr family nad(p)-dependent oxidoreductase | AES38_RS05290 | Not Available | - | 1105196 - 1105951 | 25760.0 |
| sdr family nad(p)-dependent oxidoreductase | AES38_RS05295 | Not Available | - | 1105948 - 1106715 | 25753.7 |
| mfs transporter | AES38_RS05300 | Not Available | - | 1106712 - 1108085 | 47670.3 |
| polysaccharide deacetylase | AES38_RS05305 | Not Available | - | 1108120 - 1109010 | 34048.9 |
| asparaginase | AES38_RS05310 | Not Available | - | 1109036 - 1110061 | 34323.0 |
| laci family dna-binding transcriptional regulator | AES38_RS05315 | Not Available | + | 1110232 - 1111260 | 36368.3 |
| transglutaminase family protein | AES38_RS05320 | Not Available | + | 1111317 - 1112111 | 28420.1 |
| hypothetical protein | AES38_RS05325 | Not Available | - | 1112166 - 1112810 | 21477.2 |
| arginine--trna ligase | AES38_RS05330 | Not Available | + | 1113027 - 1114691 | 60511.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
