Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 3 c-terminal domain-containing protein | AES38_RS04755 | Not Available | - | 990806 - 993280 | 86942.7 |
| mfs transporter | AES38_RS04760 | Not Available | - | 993331 - 994608 | 43929.4 |
| tetr/acrr family transcriptional regulator | AES38_RS04765 | Not Available | + | 994719 - 995363 | 22529.7 |
| duf58 domain-containing protein | AES38_RS04770 | Not Available | - | 995400 - 996707 | 47047.2 |
| moxr family atpase | AES38_RS04775 | Not Available | - | 996722 - 997675 | 34310.4 |
| duf4350 domain-containing protein | AES38_RS04780 | Not Available | - | 997672 - 998934 | 42953.8 |
| duf4129 domain-containing protein | AES38_RS04785 | Not Available | - | 998931 - 999620 | 23857.3 |
| glycerophosphoryl diester phosphodiesterase membrane domain-containing protein | AES38_RS04790 | Not Available | - | 999617 - 1000864 | 42324.2 |
| mtrab system response regulator mtra | AES38_RS04795 | Not Available | + | 1000986 - 1001666 | 24679.9 |
| hamp domain-containing sensor histidine kinase | AES38_RS04800 | Not Available | + | 1001671 - 1003041 | 49832.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
