Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | AES38_RS04655 | Not Available | + | 965604 - 967622 | 74947.3 |
| hypothetical protein | AES38_RS04660 | Not Available | + | 967812 - 969596 | 62195.0 |
| gtra family protein | AES38_RS04665 | Not Available | + | 969725 - 970195 | 17544.9 |
| o-antigen ligase family protein | AES38_RS04670 | Not Available | - | 970226 - 971518 | 45946.5 |
| o-antigen ligase | AES38_RS04675 | Not Available | - | 971567 - 973024 | 51401.9 |
| acyl-coa dehydrogenase family protein | AES38_RS04680 | Not Available | - | 973125 - 974303 | 42687.4 |
| mannose-6-phosphate isomerase, class i | AES38_RS04685 | Not Available | + | 974468 - 975784 | 46400.0 |
| udp-glucose 4-epimerase gale | AES38_RS04690 | Not Available | + | 975819 - 976787 | 34543.7 |
| whib family transcriptional regulator | AES38_RS04695 | Not Available | + | 976938 - 977255 | 11756.8 |
| glycosyltransferase family 2 protein | AES38_RS04700 | Not Available | + | 977349 - 980405 | 104618.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
