Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s6 | AES38_RS04555 | Not Available | + | 944055 - 945181 | 39040.0 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | AES38_RS04560 | Not Available | + | 945241 - 945765 | 17945.7 |
| lcp family protein | AES38_RS04565 | Not Available | + | 945762 - 947111 | 48845.2 |
| glycosyltransferase family 1 protein | AES38_RS04570 | Not Available | - | 947127 - 948266 | 40017.8 |
| abc transporter atp-binding protein | AES38_RS04575 | Not Available | - | 948358 - 949104 | 27348.0 |
| abc transporter permease | AES38_RS04580 | Not Available | - | 949088 - 949957 | 32092.9 |
| dtdp-4-dehydrorhamnose reductase | AES38_RS04585 | Not Available | - | 950052 - 950906 | 29569.6 |
| dtdp-glucose 4,6-dehydratase | AES38_RS04590 | Not Available | - | 950903 - 951892 | 36807.0 |
| gtra family protein | AES38_RS04595 | Not Available | + | 952064 - 952516 | 16019.0 |
| dtdp-4-dehydrorhamnose 3,5-epimerase family protein | AES38_RS04600 | Not Available | + | 952542 - 953147 | 22066.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
