Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tryptophan--trna ligase | AES38_RS04355 | Not Available | - | 901862 - 902875 | 36883.9 |
| exodeoxyribonuclease iii | AES38_RS04360 | Not Available | - | 902950 - 903795 | 31156.3 |
| yihy/virulence factor brkb family protein | AES38_RS04365 | Not Available | - | 903806 - 904930 | 38970.4 |
| phosphoenolpyruvate--protein phosphotransferase | AES38_RS04370 | Not Available | + | 905056 - 906711 | 56539.6 |
| succinate dehydrogenase iron-sulfur subunit | AES38_RS04375 | Not Available | - | 906790 - 907551 | 28396.9 |
| succinate dehydrogenase flavoprotein subunit | AES38_RS04380 | Not Available | - | 907609 - 909432 | 66465.6 |
| succinate dehydrogenase hydrophobic membrane anchor subunit | AES38_RS04385 | Not Available | - | 909466 - 909942 | 17334.4 |
| succinate dehydrogenase, cytochrome b556 subunit | AES38_RS04390 | Not Available | - | 909933 - 910367 | 16159.2 |
| glycosyltransferase family 1 protein | AES38_RS04395 | Not Available | - | 910508 - 911683 | 41289.4 |
| mannose-1-phosphate guanylyltransferase | AES38_RS04400 | Not Available | + | 911801 - 912922 | 39521.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
