Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sortase | AES38_RS04105 | Not Available | + | 849453 - 849995 | 16961.1 |
| vanz family protein | AES38_RS04110 | Not Available | - | 850035 - 850574 | 18936.3 |
| llm class flavin-dependent oxidoreductase | AES38_RS04115 | Not Available | + | 850662 - 851675 | 35534.2 |
| transglycosylase domain-containing protein | AES38_RS04120 | Not Available | + | 851768 - 854014 | 79923.9 |
| acyltransferase | AES38_RS04125 | Not Available | + | 854160 - 855365 | 42724.3 |
| Trna-pro | Not Available | Not Available | + | 855488 - 855561 | Not Available |
| metallophosphoesterase | AES38_RS04135 | Not Available | - | 855625 - 856569 | 34048.5 |
| transglycosylase domain-containing protein | AES38_RS04140 | Not Available | - | 856569 - 859109 | 88440.4 |
| hypothetical protein | AES38_RS04145 | Not Available | + | 859216 - 859395 | 6336.64 |
| rida family protein | AES38_RS04150 | Not Available | + | 859395 - 859859 | 15004.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
