Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DI528_04520 | Not Available | - | 1025678 - 1026559 | 32738.2 |
| methylmalonate-semialdehyde dehydrogenase (coa acylating) | DI528_04525 | Not Available | + | 1026675 - 1028171 | 53348.2 |
| duf898 domain-containing protein | DI528_04530 | Not Available | + | 1028466 - 1029539 | 40285.4 |
| metalloprotease | DI528_04535 | Not Available | + | 1029544 - 1030602 | 37765.2 |
| iron abc transporter substrate-binding protein | DI528_04540 | Not Available | - | 1030653 - 1031696 | 37918.0 |
| rrf2 family transcriptional regulator | DI528_04545 | Not Available | + | 1031882 - 1032358 | 17389.1 |
| glucose-methanol-choline oxidoreductase | DI528_04550 | Not Available | + | 1032590 - 1034191 | 57482.7 |
| gluconokinase | DI528_04555 | Not Available | + | 1034428 - 1034916 | 17354.1 |
| sensor domain-containing diguanylate cyclase | DI528_04560 | Not Available | - | 1034937 - 1036283 | 47292.0 |
| n-carbamoylputrescine amidase | DI528_04565 | Not Available | - | 1036598 - 1037470 | 31901.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.