Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminoacetone oxidase family fad-binding enzyme | DI528_04370 | Not Available | + | 987618 - 988799 | 42198.9 |
| lysr family transcriptional regulator | DI528_04375 | Not Available | + | 989571 - 990443 | 32557.0 |
| cupin domain-containing protein | DI528_04380 | Not Available | - | 990450 - 990995 | 19929.9 |
| hypothetical protein | DI528_04385 | Not Available | - | 991020 - 991352 | 11881.6 |
| hypothetical protein | DI528_04390 | Not Available | - | 991368 - 992429 | 37368.4 |
| hypothetical protein | DI528_04395 | Not Available | - | 992648 - 992893 | 8821.58 |
| isocitrate lyase | DI528_04400 | Not Available | - | 993086 - 994375 | 46901.6 |
| cro/cl family transcriptional regulator | DI528_04405 | Not Available | + | 994613 - 996034 | 51633.0 |
| spermidine/putrescine abc transporter substrate-binding protein potf | DI528_04410 | Not Available | + | 996161 - 997258 | 40456.9 |
| polyamine abc transporter atp-binding protein | DI528_04415 | Not Available | + | 997343 - 998503 | 42762.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.