Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI589_26455 | Not Available | - | 5539587 - 5540108 | 18702.9 |
| cytochrome c family protein | DI589_26460 | Not Available | - | 5540146 - 5540577 | 14797.8 |
| peptidase s9 | DI589_26465 | Not Available | + | 5540894 - 5542795 | 69616.3 |
| 7-alpha-hydroxysteroid dehydrogenase | DI589_26470 | Not Available | + | 5542906 - 5542988 | 2725.3 |
| pectate lyase | DI589_26475 | Not Available | - | 5543250 - 5544311 | 39665.1 |
| tonb-dependent receptor | DI589_26485 | Not Available | - | 5547769 - 5550534 | 99365.0 |
| 2-keto-3-deoxygluconate kinase | DI589_26490 | Not Available | + | 5550808 - 5551830 | 35939.9 |
| 2-dehydro-3-deoxyphosphogluconate aldolase | DI589_26495 | Not Available | + | 5551817 - 5552361 | 18780.8 |
| hypothetical protein | DI589_26500 | Not Available | + | 5552362 - 5552872 | 18145.2 |
| cation transporter | DI589_26505 | Not Available | + | 5553260 - 5553640 | 13338.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.