Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | DI589_25840 | Not Available | - | 5437767 - 5438288 | 18585.5 |
| gnat family n-acetyltransferase | DI589_25845 | Not Available | - | 5438288 - 5439562 | 47293.5 |
| lysr family transcriptional regulator | DI589_25850 | Not Available | + | 5439797 - 5440963 | 42726.2 |
| hypothetical protein | DI589_25855 | Not Available | + | 5441158 - 5441562 | 14966.2 |
| hypothetical protein | DI589_25860 | Not Available | - | 5441919 - 5442140 | 8118.6 |
| twin-arginine translocation pathway signal | DI589_25865 | Not Available | + | 5442475 - 5442672 | 7690.94 |
| aaa family atpase | DI589_25870 | Not Available | + | 5442689 - 5443684 | 35850.1 |
| duf58 domain-containing protein | DI589_25875 | Not Available | + | 5443702 - 5444604 | 33196.4 |
| hypothetical protein | DI589_25880 | Not Available | + | 5444601 - 5445749 | 41789.7 |
| hypothetical protein | DI589_25885 | Not Available | + | 5445746 - 5447902 | 77984.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.