Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI589_25735 | Not Available | - | 5415491 - 5415784 | 11185.2 |
| tryptophan--trna ligase | DI589_25740 | Not Available | - | 5415807 - 5417108 | 48197.8 |
| hypothetical protein | DI589_25745 | Not Available | + | 5417230 - 5418063 | 30130.4 |
| csbd family protein | DI589_25750 | Not Available | - | 5418262 - 5418483 | 8530.93 |
| entericidin | DI589_25755 | Not Available | - | 5418674 - 5418811 | 4616.78 |
| entericidin | DI589_25760 | Not Available | - | 5418866 - 5419018 | 5205.48 |
| arginase | DI589_25765 | Not Available | - | 5419160 - 5420080 | 33041.7 |
| mechanosensitive ion channel protein mscs | DI589_25770 | Not Available | - | 5420260 - 5421897 | 58989.3 |
| short-chain dehydrogenase | DI589_25775 | Not Available | + | 5422269 - 5423421 | 42121.0 |
| phage tail protein | DI589_25780 | Not Available | + | 5423422 - 5423967 | 20003.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.