Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI589_25340 | Not Available | + | 5344899 - 5345159 | 9562.36 |
| aspartate transaminase | DI589_25345 | Not Available | + | 5345198 - 5346400 | 44120.7 |
| lyse family translocator | DI589_25350 | Not Available | + | 5346422 - 5347027 | 21336.7 |
| hypothetical protein | DI589_25355 | Not Available | + | 5347119 - 5347916 | 29813.2 |
| type ii toxin-antitoxin system prevent-host-death family antitoxin | DI589_25370 | Not Available | - | 5348590 - 5348808 | 7849.55 |
| dna helicase uvrd | DI589_25375 | Not Available | - | 5349002 - 5349361 | 12839.9 |
| hypothetical protein | DI589_25380 | Not Available | - | 5349365 - 5349955 | 21515.3 |
| response regulator receiver protein | DI589_25385 | Not Available | - | 5349948 - 5350676 | 27664.9 |
| dna helicase | DI589_25390 | Not Available | + | 5351267 - 5357251 | 222362.0 |
| dna repair exonuclease | DI589_25395 | Not Available | + | 5357254 - 5358378 | 40620.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.