Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase | DI528_04220 | Not Available | + | 957986 - 959572 | 57456.3 |
| yafy family transcriptional regulator | DI528_04225 | Not Available | - | 959573 - 960256 | 25545.9 |
| hypothetical protein | DI528_04230 | Not Available | + | 960342 - 960644 | 11083.0 |
| dna alkylation repair protein | DI528_04235 | Not Available | + | 960650 - 961759 | 41118.5 |
| cytochrome b | DI528_04240 | Not Available | - | 961854 - 962405 | 20399.0 |
| pepsy domain-containing protein | DI528_04245 | Not Available | - | 962426 - 962701 | 9646.55 |
| peptidase | DI528_04250 | Not Available | + | 962837 - 963205 | 13583.2 |
| dna-binding response regulator | DI528_04255 | Not Available | + | 963202 - 963867 | 24662.8 |
| atp-binding protein | DI528_04260 | Not Available | + | 963864 - 965210 | 49023.9 |
| rna helicase | DI528_04265 | Not Available | + | 965456 - 966898 | 51984.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.