Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI528_04170 | Not Available | - | 946471 - 946833 | 13759.6 |
| nucleotidyltransferase | DI528_04175 | Not Available | - | 946830 - 947123 | 10907.1 |
| glutamine synthetase | DI528_04180 | Not Available | - | 947354 - 948388 | 38965.7 |
| duf2735 domain-containing protein | DI528_04185 | Not Available | + | 948792 - 948974 | 7083.44 |
| 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase | DI528_04190 | Not Available | - | 949319 - 949819 | 18215.5 |
| allantoinase puue | DI528_04195 | Not Available | - | 949824 - 950744 | 35085.5 |
| hypothetical protein | DI528_04200 | Not Available | - | 950973 - 951680 | 26395.8 |
| d-amino-acid oxidase | DI528_04205 | Not Available | - | 951787 - 952983 | 42637.2 |
| 5-methylaminomethyl-2-thiouridine methyltransferase | DI528_04210 | Not Available | + | 952982 - 953719 | 26892.6 |
| hybrid sensor histidine kinase/response regulator | DI528_04215 | Not Available | - | 953726 - 957874 | 153924.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.