Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf932 domain-containing protein | DI589_24550 | Not Available | + | 5179903 - 5181093 | 43991.8 |
| hypothetical protein | DI589_24560 | Not Available | + | 5182185 - 5182397 | 7916.28 |
| duf1173 domain-containing protein | DI589_24565 | Not Available | - | 5182479 - 5183669 | 44059.5 |
| hypothetical protein | DI589_24575 | Not Available | + | 5184269 - 5184673 | 14786.5 |
| methylase | DI589_24590 | Not Available | + | 5185209 - 5189627 | 161075.0 |
| dna primase | DI589_24595 | Not Available | + | 5189633 - 5190670 | 37058.2 |
| duf2493 domain-containing protein | DI589_24605 | Not Available | + | 5191000 - 5191941 | 35178.5 |
| hypothetical protein | DI589_24610 | Not Available | + | 5192207 - 5192839 | 22830.5 |
| type ii toxin-antitoxin system pard family antitoxin | DI589_24615 | Not Available | + | 5192957 - 5193223 | 9690.47 |
| type ii toxin-antitoxin system rele/pare family toxin | DI589_24620 | Not Available | + | 5193220 - 5193516 | 11244.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.