Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | DI589_24345 | Not Available | - | 5141579 - 5142481 | 32480.2 |
| amidohydrolase | DI589_24350 | Not Available | - | 5142539 - 5143693 | 41065.3 |
| 2-hydroxymuconic semialdehyde dehydrogenase | DI589_24355 | Not Available | + | 5143931 - 5145418 | 52660.4 |
| 2-keto-4-pentenoate hydratase | DI589_24360 | Not Available | + | 5145423 - 5146220 | 27824.6 |
| acetaldehyde dehydrogenase (acetylating) | DI589_24365 | Not Available | + | 5146217 - 5147167 | 33051.8 |
| 4-hydroxy-2-oxovalerate aldolase | DI589_24370 | Not Available | + | 5147167 - 5148195 | 36848.9 |
| 4-oxalocrotonate decarboxylase | DI589_24375 | Not Available | + | 5148192 - 5148971 | 27379.8 |
| 4-oxalocrotonate tautomerase | DI589_24380 | Not Available | + | 5148975 - 5149169 | 6761.14 |
| duf3100 domain-containing protein | DI589_24385 | Not Available | + | 5149231 - 5150574 | 47115.5 |
| cytochrome b | DI589_24390 | Not Available | + | 5150587 - 5151159 | 21205.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.