Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit beta | DI589_24045 | Not Available | - | 5074701 - 5076116 | 49751.2 |
| hypothetical protein | DI589_24050 | Not Available | + | 5076306 - 5076590 | 9288.26 |
| hypothetical protein | DI589_24055 | Not Available | + | 5076679 - 5077530 | 31088.9 |
| duf2063 domain-containing protein | DI589_24060 | Not Available | + | 5077541 - 5078320 | 27671.1 |
| doxx family protein | DI589_24065 | Not Available | + | 5078310 - 5078786 | 17239.3 |
| mate family efflux transporter | DI589_24070 | Not Available | - | 5078749 - 5079999 | 44271.8 |
| hypothetical protein | DI589_24075 | Not Available | + | 5080349 - 5080476 | 4428.4 |
| nad-dependent dehydratase | DI589_24080 | Not Available | - | 5080617 - 5081579 | 36055.4 |
| amidase | DI589_24085 | Not Available | - | 5081989 - 5083413 | 51230.2 |
| carboxypeptidase | DI589_24090 | Not Available | - | 5083425 - 5084558 | 40273.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.