Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DI589_23945 | Not Available | - | 5057186 - 5058265 | 39318.5 |
| abc transporter permease | DI589_23950 | Not Available | - | 5058270 - 5059082 | 29178.5 |
| spermidine/putrescine abc transporter permease | DI589_23955 | Not Available | - | 5059082 - 5060008 | 33355.1 |
| abc transporter substrate-binding protein | DI589_23960 | Not Available | - | 5060035 - 5061168 | 42509.5 |
| alcohol dehydrogenase | DI589_23965 | Not Available | + | 5061552 - 5062595 | 36760.7 |
| ring-cleaving dioxygenase | DI589_23970 | Not Available | - | 5062644 - 5064170 | 54786.2 |
| spermidine/putrescine abc transporter atp-binding protein | DI589_23975 | Not Available | - | 5064262 - 5065320 | 38233.3 |
| spermidine/putrescine abc transporter permease | DI589_23980 | Not Available | - | 5065317 - 5066144 | 30074.5 |
| acriflavin resistance protein | DI589_23985 | Not Available | - | 5066141 - 5067055 | 32908.2 |
| iron abc transporter substrate-binding protein | DI589_23990 | Not Available | - | 5067139 - 5068236 | 38560.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.