Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI589_23840 | Not Available | - | 5026156 - 5027040 | 33073.5 |
| hypothetical protein | DI589_23845 | Not Available | + | 5027188 - 5027823 | 23447.8 |
| hypothetical protein | DI589_23850 | Not Available | - | 5027855 - 5028040 | 6817.1 |
| hypothetical protein | DI589_23855 | Not Available | + | 5028185 - 5028526 | 12262.5 |
| sir2 family protein | DI589_23860 | Not Available | + | 5028762 - 5030531 | 64614.1 |
| is3 family transposase | DI589_23865 | Not Available | + | 5030820 - 5031509 | 26223.7 |
| beta-ketoacyl synthase | DI589_23870 | Not Available | + | 5032325 - 5039773 | 261917.0 |
| 8-amino-7-oxononanoate synthase | DI589_23875 | Not Available | + | 5039766 - 5041151 | 49280.1 |
| translocation protein | DI589_23880 | Not Available | + | 5041180 - 5041971 | 28239.2 |
| capsular biosynthesis protein | DI589_23885 | Not Available | + | 5041986 - 5043575 | 60289.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.