Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI589_23785 | Not Available | - | 5011529 - 5012146 | 22317.3 |
| hypothetical protein | DI589_23790 | Not Available | + | 5012299 - 5013600 | 44166.9 |
| hypothetical protein | DI589_23795 | Not Available | + | 5014060 - 5014416 | 13206.6 |
| xre family transcriptional regulator | DI589_23805 | Not Available | - | 5015990 - 5016313 | 11965.4 |
| hypothetical protein | DI589_23810 | Not Available | - | 5016533 - 5019277 | 97080.1 |
| duf2130 domain-containing protein | DI589_23815 | Not Available | - | 5019366 - 5020637 | 47431.7 |
| nuclease | DI589_23820 | Not Available | - | 5020742 - 5021644 | 32763.6 |
| hypothetical protein | DI589_23825 | Not Available | + | 5021981 - 5024068 | 76721.6 |
| atp-dependent helicase | DI589_23830 | Not Available | + | 5024068 - 5025927 | 67750.9 |
| hypothetical protein | DI589_23835 | Not Available | - | 5026011 - 5026097 | 3207.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.