Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| catechol 1,2-dioxygenase | DI589_23585 | Not Available | + | 4982102 - 4982992 | 33032.5 |
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | DI589_23590 | Not Available | + | 4983044 - 4983826 | 28152.0 |
| 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase | DI589_23595 | Not Available | + | 4983835 - 4984596 | 26626.9 |
| hypothetical protein | DI589_23600 | Not Available | + | 4984587 - 4985420 | 28886.3 |
| hypothetical protein | DI589_23605 | Not Available | - | 4985550 - 4985792 | 8550.06 |
| 2-dehydropantoate 2-reductase | DI589_23610 | Not Available | + | 4985953 - 4986957 | 35571.3 |
| aaa family atpase | DI589_23615 | Not Available | - | 4986964 - 4988277 | 48467.5 |
| serine protease | DI589_23620 | Not Available | - | 4988354 - 4989751 | 48654.4 |
| thioesterase | DI589_23625 | Not Available | + | 4989993 - 4990430 | 15890.0 |
| marr family transcriptional regulator | DI589_23630 | Not Available | + | 4990498 - 4990959 | 16702.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.