Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DI528_04070 | Not Available | - | 926477 - 927658 | 40687.9 |
| type i methionyl aminopeptidase | DI528_04075 | Not Available | - | 927743 - 928492 | 26968.2 |
| llm class flavin-dependent oxidoreductase | DI528_04080 | Not Available | - | 928565 - 929611 | 37993.6 |
| 3-hydroxybutyrate dehydrogenase | DI528_04085 | Not Available | + | 929845 - 930618 | 27258.9 |
| xanthine dehydrogenase small subunit | DI528_04090 | Not Available | + | 930699 - 932168 | 53232.8 |
| xanthine dehydrogenase molybdopterin binding subunit | DI528_04095 | Not Available | + | 932334 - 934670 | 85084.0 |
| xanthine dehydrogenase accessory protein xdhc | DI528_04100 | Not Available | + | 934934 - 935788 | 30225.4 |
| hypothetical protein | DI528_04105 | Not Available | - | 935761 - 936069 | 11863.2 |
| lysr family transcriptional regulator | DI528_04110 | Not Available | + | 936102 - 937019 | 33861.7 |
| lysr family transcriptional regulator | DI528_04115 | Not Available | + | 937313 - 938233 | 34204.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.