Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino acid transporter | DI589_23110 | Not Available | + | 4880626 - 4881237 | 22029.3 |
| hypothetical protein | DI589_23115 | Not Available | - | 4881230 - 4881718 | 16885.2 |
| sdr family oxidoreductase | DI589_23120 | Not Available | - | 4881732 - 4882523 | 27446.3 |
| arac family transcriptional regulator | DI589_23125 | Not Available | + | 4882653 - 4883630 | 35633.9 |
| lysr family transcriptional regulator | DI589_23130 | Not Available | + | 4883679 - 4884587 | 33021.7 |
| spermidine/putrescine abc transporter substrate-binding protein | DI589_23135 | Not Available | + | 4884714 - 4885874 | 42440.2 |
| polyamine abc transporter atp-binding protein | DI589_23140 | Not Available | + | 4885974 - 4886960 | 35367.7 |
| spermidine/putrescine abc transporter permease | DI589_23145 | Not Available | + | 4886957 - 4887907 | 34411.1 |
| spermidine/putrescine abc transporter permease | DI589_23150 | Not Available | + | 4887897 - 4888712 | 29279.1 |
| gamma-aminobutyraldehyde dehydrogenase | DI589_23155 | Not Available | + | 4888736 - 4890160 | 51062.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.