Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI589_23045 | Not Available | - | 4866351 - 4868354 | 73207.1 |
| phosphate acetyltransferase | DI589_23050 | Not Available | - | 4868721 - 4870319 | 55664.1 |
| acetate kinase | DI589_23055 | Not Available | - | 4870332 - 4871555 | 43041.0 |
| lysr family transcriptional regulator | DI589_23060 | Not Available | - | 4871762 - 4872694 | 34463.3 |
| muconate cycloisomerase | DI589_23065 | Not Available | + | 4872852 - 4874033 | 41687.6 |
| muconolactone delta-isomerase | DI589_23070 | Not Available | + | 4874045 - 4874335 | 11130.5 |
| catechol 1,2-dioxygenase | DI589_23075 | Not Available | + | 4874409 - 4875347 | 34157.1 |
| 3-oxoadipate enol-lactonase | DI589_23095 | Not Available | + | 4877662 - 4878450 | 27535.8 |
| dna-binding protein | DI589_23100 | Not Available | + | 4878532 - 4879473 | 34337.3 |
| argp/lysg family dna-binding transcriptional regulator | DI589_23105 | Not Available | - | 4879600 - 4880526 | 33863.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.