Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flp family type ivb pilin | DI589_22745 | Not Available | + | 4818920 - 4819102 | 6059.35 |
| sam-dependent methyltransferase | DI589_22750 | Not Available | - | 4819173 - 4820045 | 31305.8 |
| amidophosphoribosyltransferase | DI589_22755 | Not Available | + | 4820108 - 4820887 | 28105.4 |
| glutaredoxin 3 | DI589_22760 | Not Available | + | 4820936 - 4821199 | 9512.26 |
| nitrilase | DI589_22765 | Not Available | + | 4821201 - 4822031 | 29624.5 |
| duf1178 domain-containing protein | DI589_22770 | Not Available | + | 4822052 - 4822480 | 15326.1 |
| bifunctional 3-demethylubiquinol 3-o-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase | DI589_22775 | Not Available | - | 4822485 - 4823231 | 27240.9 |
| hypothetical protein | DI589_22780 | Not Available | + | 4823304 - 4823621 | 11956.8 |
| aspartate kinase | DI589_22785 | Not Available | + | 4823837 - 4825111 | 45297.3 |
| phosphoenolpyruvate--protein phosphotransferase | DI589_22790 | Not Available | + | 4825198 - 4827465 | 83598.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.