Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | DI589_22080 | Not Available | + | 4678940 - 4680763 | 64248.7 |
| isopropylmalate/homocitrate/citramalate synthase | DI589_22085 | Not Available | - | 4680783 - 4681184 | 14770.4 |
| gnat family n-acetyltransferase | DI589_22090 | Not Available | + | 4681274 - 4681861 | 22478.8 |
| amidohydrolase | DI589_22095 | Not Available | + | 4681861 - 4682730 | 32041.3 |
| type iv secretory pathway protein acvb | DI589_22100 | Not Available | - | 4682743 - 4684086 | 46922.8 |
| hypothetical protein | DI589_22105 | Not Available | - | 4684083 - 4685366 | 46802.6 |
| bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | DI589_22110 | Not Available | + | 4685713 - 4687701 | 71620.4 |
| transcription elongation factor grea | DI589_22115 | Not Available | + | 4687819 - 4688301 | 17666.8 |
| metal-dependent hydrolase | DI589_22120 | Not Available | + | 4688393 - 4689313 | 32733.8 |
| hypothetical protein | DI589_22125 | Not Available | + | 4689452 - 4689807 | 12233.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.