Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI589_21770 | Not Available | - | 4612835 - 4613242 | 13915.5 |
| creatininase | DI589_21775 | Not Available | + | 4613554 - 4614351 | 29439.3 |
| lysr family transcriptional regulator | DI589_21780 | Not Available | - | 4614358 - 4615311 | 34493.6 |
| nitrate abc transporter substrate-binding protein | DI589_21785 | Not Available | + | 4615495 - 4616511 | 37152.3 |
| nitrate/sulfonate/bicarbonate abc transporter atp-binding protein | DI589_21790 | Not Available | + | 4616578 - 4617390 | 29301.6 |
| abc transporter atp-binding protein | DI589_21795 | Not Available | + | 4617390 - 4618223 | 30190.1 |
| cytosine deaminase | DI589_21800 | Not Available | + | 4618223 - 4619539 | 48338.6 |
| fad-linked oxidase | DI589_21805 | Not Available | + | 4619541 - 4620944 | 51560.3 |
| nad(p)h dehydrogenase | DI589_21810 | Not Available | + | 4620951 - 4621532 | 22340.0 |
| photosystem reaction center subunit h | DI589_21815 | Not Available | - | 4621593 - 4622057 | 16005.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.