Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI589_21720 | Not Available | - | 4601563 - 4601949 | 13367.4 |
| rna pseudouridine synthase | DI589_21725 | Not Available | + | 4601994 - 4603016 | 36901.1 |
| rna polymerase sigma factor rpoh | DI589_21730 | Not Available | + | 4603278 - 4604180 | 34328.1 |
| hypothetical protein | DI589_21735 | Not Available | - | 4604251 - 4605678 | 48724.8 |
| redox-sensitive transcriptional activator soxr | DI589_21740 | Not Available | + | 4605760 - 4606227 | 16926.3 |
| gnat family n-acetyltransferase | DI589_21745 | Not Available | + | 4606418 - 4606888 | 17345.0 |
| alpha/beta hydrolase | DI589_21750 | Not Available | - | 4606944 - 4607837 | 32341.1 |
| hypothetical protein | DI589_21755 | Not Available | - | 4607989 - 4610181 | 77046.9 |
| adenylosuccinate synthase | DI589_21760 | Not Available | - | 4610265 - 4611563 | 46554.7 |
| eama family transporter | DI589_21765 | Not Available | + | 4611781 - 4612665 | 31503.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.