Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxy-acid oxidase | DI589_21570 | Not Available | - | 4572815 - 4574008 | 41470.2 |
| fad-binding oxidoreductase | DI589_21575 | Not Available | - | 4574005 - 4575441 | 50886.4 |
| lysr family transcriptional regulator | DI589_21580 | Not Available | + | 4575568 - 4576464 | 32420.3 |
| dna mismatch repair protein mutt | DI589_21585 | Not Available | + | 4576613 - 4577098 | 18199.0 |
| anion permease | DI589_21590 | Not Available | + | 4577238 - 4578740 | 52697.4 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | DI589_21595 | Not Available | + | 4578750 - 4579487 | 26953.8 |
| glutamate--cysteine ligase | DI589_21600 | Not Available | + | 4579671 - 4581038 | 50079.4 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | DI589_21605 | Not Available | - | 4581066 - 4582277 | 42222.1 |
| hypothetical protein | DI589_21610 | Not Available | - | 4582639 - 4582956 | 11509.6 |
| lysr family transcriptional regulator | DI589_21615 | Not Available | + | 4583096 - 4584058 | 35214.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.