Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp phosphoribosyltransferase regulatory subunit | DI589_21520 | Not Available | - | 4563546 - 4564667 | 40705.0 |
| histidine--trna ligase | DI589_21525 | Not Available | - | 4564667 - 4566181 | 55411.1 |
| hypothetical protein | DI589_21530 | Not Available | + | 4566411 - 4567166 | 28000.9 |
| hypothetical protein | DI589_21535 | Not Available | + | 4567217 - 4567573 | 12549.1 |
| duf305 domain-containing protein | DI589_21540 | Not Available | + | 4567646 - 4568008 | 13136.0 |
| had family hydrolase | DI589_21545 | Not Available | + | 4568121 - 4568828 | 25820.8 |
| dna-3-methyladenine glycosylase i | DI589_21550 | Not Available | - | 4568825 - 4569466 | 24777.5 |
| hypothetical protein | DI589_21555 | Not Available | + | 4569678 - 4570493 | 29922.8 |
| l,d-transpeptidase | DI589_21560 | Not Available | + | 4570643 - 4571332 | 25029.1 |
| glycolate oxidase iron-sulfur subunit | DI589_21565 | Not Available | - | 4571479 - 4572810 | 48008.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.