Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| formate--tetrahydrofolate ligase | DI528_03865 | Not Available | - | 882847 - 884526 | 59962.1 |
| hypothetical protein | DI528_03870 | Not Available | + | 884762 - 885277 | 18832.7 |
| hypothetical protein | DI528_03875 | Not Available | - | 885316 - 886278 | 34116.6 |
| bifunctional proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | DI528_03880 | Not Available | - | 886518 - 889637 | 112152.0 |
| arsr family transcriptional regulator | DI528_03885 | Not Available | + | 889748 - 890209 | 17209.1 |
| luxr family transcriptional regulator | DI528_03890 | Not Available | + | 890371 - 891090 | 27330.3 |
| diguanylate cyclase | DI528_03895 | Not Available | + | 891140 - 891601 | 18009.3 |
| duf2333 domain-containing protein | DI528_03900 | Not Available | - | 891694 - 892803 | 42296.5 |
| hypothetical protein | DI528_03905 | Not Available | - | 892796 - 894094 | 49155.6 |
| hypothetical protein | DI528_03910 | Not Available | - | 894091 - 894495 | 15294.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.