Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cro/cl family transcriptional regulator | DI589_21110 | Not Available | + | 4472676 - 4474088 | 52442.0 |
| 3-hydroxyisobutyryl-coa hydrolase | DI589_21115 | Not Available | - | 4474133 - 4475218 | 38754.4 |
| heme abc transporter atp-binding protein | DI589_21120 | Not Available | - | 4475293 - 4476075 | 27357.1 |
| iron abc transporter | DI589_21125 | Not Available | - | 4476075 - 4477148 | 35891.1 |
| hemin abc transporter substrate-binding protein | DI589_21130 | Not Available | - | 4477160 - 4478044 | 30333.9 |
| antibiotic biosynthesis monooxygenase | DI589_21135 | Not Available | + | 4478181 - 4478525 | 13329.5 |
| heme utilization cystosolic carrier protein hutx | DI589_21140 | Not Available | + | 4478522 - 4479037 | 18227.7 |
| duf454 domain-containing protein | DI589_21145 | Not Available | + | 4479144 - 4479503 | 13054.4 |
| argininosuccinate synthase | DI589_21150 | Not Available | + | 4479638 - 4480861 | 45200.1 |
| bcr/cfla family drug resistance efflux transporter | DI589_21155 | Not Available | - | 4480922 - 4482100 | 40504.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.