Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | DI589_21060 | Not Available | + | 4455257 - 4456540 | 45954.1 |
| aldehyde dehydrogenase family protein | DI589_21065 | Not Available | + | 4456616 - 4458157 | 53816.4 |
| aspartate transaminase | DI589_21070 | Not Available | + | 4458170 - 4459399 | 44037.2 |
| aminoglycoside phosphotransferase | DI589_21075 | Not Available | + | 4459502 - 4461016 | 54919.8 |
| peptidase t4 | DI589_21080 | Not Available | + | 4461224 - 4462222 | 33420.3 |
| carbonate dehydratase | DI589_21085 | Not Available | - | 4462230 - 4464953 | 96876.1 |
| acetate/propionate family kinase | DI589_21090 | Not Available | + | 4465075 - 4466256 | 42648.3 |
| methylmalonyl-coa mutase | DI589_21095 | Not Available | - | 4466350 - 4468491 | 77396.6 |
| acetyl/propionyl-coa carboxylase subunit alpha | DI589_21100 | Not Available | - | 4469019 - 4470974 | 70152.4 |
| methylmalonyl-coa carboxyltransferase | DI589_21105 | Not Available | - | 4470990 - 4472522 | 55924.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.