Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dehydrogenase | DI528_03815 | Not Available | - | 868464 - 871031 | 94868.0 |
| ydiu family protein | DI528_03820 | Not Available | - | 871212 - 872912 | 62489.3 |
| hypothetical protein | DI528_03825 | Not Available | + | 872982 - 873479 | 18076.3 |
| protein hupe | DI528_03830 | Not Available | + | 873843 - 874415 | 18822.6 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | DI528_03835 | Not Available | - | 874587 - 875051 | 17132.4 |
| cation transporter | DI528_03840 | Not Available | - | 875048 - 875971 | 32772.2 |
| protein tyrosine phosphatase | DI528_03845 | Not Available | + | 876246 - 876812 | 21040.4 |
| anthranilate synthase component i | DI528_03850 | Not Available | - | 876897 - 879086 | 80931.6 |
| extensin | DI528_03855 | Not Available | + | 879391 - 880272 | 31154.0 |
| tonb-dependent receptor | DI528_03860 | Not Available | - | 880349 - 882592 | 81447.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.